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Tag: Microbes

Microbes New Research New Species Organisms Uncategorized

Beaches, Trees, and Mysterious Species : A tribute to Evan

Holly Bik August 8, 2012 18S rRNA454eukaryotesgenomicshigh-throughput sequencingLabyrinthulidsmetagenomicsMicrobes

At the end of May I received some awful news. My former lab manager reached out with an ominous phone call: a high school student…

View More Beaches, Trees, and Mysterious Species : A tribute to Evan
Conferences Microbes New Research Organisms

A Scientific Feast of Ocean Microbiology – notes from the #asm2012 conference in San Francisco

Holly Bik June 23, 2012 archaeaBacteriaDrinkingeukaryotesMicrobesmicrobiologyoceanviruses

[View the story “#asm2012 – A Scientific Feast of Ocean Microbiology!” on Storify]

View More A Scientific Feast of Ocean Microbiology – notes from the #asm2012 conference in San Francisco
Microbes Pictures and Movies

The Sea We’ve Hardly Seen

Miriam Goldstein May 18, 2012 Melissa GarrenMicrobesmicrobiologistmicrobiomeTED

I am admittedly a huge invertebrate nerd. But there’s a lot more going on in the ocean than can be caught with a plankton net.…

View More The Sea We’ve Hardly Seen
Conservation & Environment Microbes Organisms Vessels and Equipment

Microbiology at Sea: A tale of ballast, vomit, and cockroaches

Holly Bik May 17, 2012 BacteriaBallastcockroachesMicrobesmicrobiomeSeasick

California has been a big transition for me. I mean big. Not only am I now living in the sun-drenched utopia I have long pined…

View More Microbiology at Sea: A tale of ballast, vomit, and cockroaches
Microbes Organisms Seeps, Vent, & Whale Falls

In the oceans, aliens lie hidden and waiting

Holly Bik April 26, 2012 16SBacteriaDNAMicrobesrRNAsulfurThiomargarita namibiensis

The real title of the paper is “Multiple self-splicing introns in the 16S rRNA genes of giant sulfur bacteria”. But who’s going to fall out of…

View More In the oceans, aliens lie hidden and waiting
Expeditions

Challenger Deep: What we can learn from a single, half core of mud

Holly Bik March 28, 2012 Challenger DeepDeepsea ChallengeDNAJames CameronMariana TrenchmetagenomicsMicrobesPacific Ocean

James Cameron’s descent to the Challenger Deep – we have adventure, intrigue, and a great story for the media. But we also have an amazing…

View More Challenger Deep: What we can learn from a single, half core of mud
Ecology Microbes New Research Organisms

Big text files can tell you how the ocean works

Holly Bik September 3, 2011 Bacteriahigh-throughput sequencingmetagenomicsMicrobespelagicSeasonalityUK

…because “High-throughput sequencing confers a deep view of seasonal community dynamics in pelagic marine environments”, however appropriate a title, seems far too dry and technical…

View More Big text files can tell you how the ocean works
Climate Change Conservation & Environment Microbes Organisms Uncategorized

The Circle of Life (and how Jellyfish screw it up)

Holly Bik June 14, 2011 Bacteriaclimate changehuman impactjellyfishMicrobes

Mufasa was right.  We’re all intertwined.  Whether we humans like to admit it or not, every action by a living organism on Earth has repercussions. …

View More The Circle of Life (and how Jellyfish screw it up)
Microbes New Research Seeps, Vent, & Whale Falls

Predicting Microbial Communities in the Deep-sea

Holly Bik May 14, 2011 16SarchaeaBacteriaDNAhigh-throughput sequencinghydrotermal ventLost CityMicrobesrRNA

I recently reported on the awesomeness of high-throughput sequencing technologies, and commented on their huge potential for transforming the way biologists do business.  (Seriously, people,…

View More Predicting Microbial Communities in the Deep-sea
Ecology Microbes New Species Organisms

Metagenomics: Transforming our understanding of oceans

Holly Bik April 26, 2011 454DNAIlluminametagenomicsMicrobesRB Editor's Selectionsequencing

If you’ve ever talked to me in person for more than 5 minutes, I’ve probably mentioned the !#$%*ING AWESOMENESS of high-throughput sequencing.  Frankly, I’m a…

View More Metagenomics: Transforming our understanding of oceans

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